Re: New version of Galaxy

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Re: New version of Galaxy

Julien Lagarde
Hi Anton,
amazingly i was just about to send you the 'user account' suggestion ;-)
does that mean that when sharing a history with other people, the
history owner would be able to set basic read/write access to it? that
would be very useful!

i have another suggestion: when creating a new history item with the
left-pane tools, and then editing its attributes to make it more
human-readable, would it be possible to keep its original attributes
somewhere? for instance:
1- i subtract gencode exons from my est alignments
2- i rename the output to 'ESTs not overlapping gencode exons'
3- i do whatever operation on 'ESTs not overlapping gencode exons'.
let's say it gives me weird results, so i want to check if i did the
right thing at step 1. AFAIK this is impossible right now.
see what i mean?

cheers
j


Anton Nekrutenko wrote:

> Folks,
>
> A new version (2.2) of Galaxy is available at
>
> http://g2.bx.psu.edu:8889
>
> Aside from completely new underpinnings it now features USER ACCOUNTS
> and the ability to have MULTIPLE HISTORIES for each user.
>
> IMPORTANT -> THIS IS A TEST SITE. Once we move it to the production
> level all histories will be LOST.
>
> The stable version of Galaxy, Galaxy2ENCODE and the old test site are
> still available at the following URLs:
>
> http://main.g2.bx.psu.edu
> http://encode.g2.bx.psu.edu
> http://test.g2.bx.psu.edu
>
> SEND FEEDBACK to [hidden email]
>
> ----------------------------------------------------------------------------------
>
> New to Galaxy? See these two movies:
>
> Here is a short QuickTime movie showing Galaxy's usage example:
>
> http://www.bx.psu.edu/~james/galaxy_screencasts/JoinSNPs.mov
>
> A more complex example [requiring popcorn (or beer) -> 20 min] with
> ENCODE data is here:
>
> http://www.bx.psu.edu/trac/local/encodeAnalysisExample.mov
> ----------------------------------------------------------------------------------
>
>
> Thanks for your support!
>
> Galaxy Team
>
>
> Anton Nekrutenko
> Assistant Professor
> Department of Biochemistry and Molecular Biology
> Center for Comparative Genomics and Bioinformatics
> 505 Wartik Building
> PennState University
> University Park, PA 16802
> 814 865-4752
> 814 863-6699 FAX
> [hidden email]
> http://www.bx.psu.edu/~anton
> http://g2.bx.psu.edu
>
>
>

--
----------------------------------------------
Julien Lagarde
Genome Bioinformatics Research Group
GRIB/IMIM
Pg. Maritim de la Barceloneta 37-49
E-08003 BARCELONA - Spain
Tel: +34 93 224 0886
--------------------