[Galaxy-user] Fwd: [Fwd: mail failed, returning to sender]

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[Galaxy-user] Fwd: [Fwd: mail failed, returning to sender]

Anton Nekrutenko

Anton Nekrutenko
Assistant Professor
Department of Biochemistry and Molecular Biology
Center for Comparative Genomics and Bioinformatics
505 Wartik Building
PennState University
University Park, PA 16802
814 865-4752
814 863-6699 FAX
[hidden email]
http://www.bx.psu.edu/~anton
http://g2.bx.psu.edu


Begin forwarded message:

> From: Radek Szklarczyk <[hidden email]>
> Date: January 17, 2006 7:05:00 AM EST
> To: Anton Nekrutenko <[hidden email]>
> Subject: [Fwd: mail failed, returning to sender]
>
> It bounces from [hidden email] (email from the galaxy web site).
> Anyway, I'd like to submit a bug report
> r
>
> -------- Original Message --------
> Subject: mail failed, returning to sender
> Date: Tue, 17 Jan 2006 12:02 +0100
> From: <[hidden email]>
> To: [hidden email]
>
>
>
> |------------------------- Failed addresses follow:  
> ---------------------|
> <[hidden email]> ... transport smtp: 550 <[hidden email]>:  
> Recipient address rejected: User unknown in local recipient table
> |------------------------- Message text follows:  
> ------------------------|
> Received: from [130.37.31.65] (poederdoos.cs.vu.nl [130.37.31.65])
> by top.few.vu.nl with esmtp (Smail #108)
> id m1Eyobm-0002XpC; Tue, 17 Jan 2006 12:02 +0100
> To:  [hidden email]
> Subject: bug: genome intervals coord/documentation?
>
> in the help of "file upload" it says that the coords in genomic  
> interval file are 0-based, end exclusive. Neither of these seem to  
> be true, file:
>
> #CHROM    START    END    STRAND
> chr1    108333207    108333209    +
>
> Extracts the sequence
>
>> hg15_chr1_108333207_108333209_+
> ATG
>
> which is not 0-based (the same seq you can retrieve with genome  
> browser, which is 1-based), neither end-exclusive (3 nucleotides).
>
>
> --
> Radek Szklarczyk, [hidden email], www.cs.vu.nl/~radek
>


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Re: Fwd: [Fwd: mail failed, returning to sender]

Cathy Riemer
The wiki page says users should contact [hidden email],
but the center panel of the initial Galaxy screen still says
[hidden email].

Even when this is fixed, some users may remember the old address,
have it in their address books, reply to an old message, etc.

Can we have [hidden email] automatically forward to galaxy-user?
Bounces from published addresses do not look good...

-Cathy


On Tue, Jan 17, 2006 at 09:13:29AM -0500, Anton Nekrutenko wrote:

>
>
> Begin forwarded message:
>
> >From: Radek Szklarczyk <[hidden email]>
> >Date: January 17, 2006 7:05:00 AM EST
> >To: Anton Nekrutenko <[hidden email]>
> >Subject: [Fwd: mail failed, returning to sender]
> >
> >It bounces from [hidden email] (email from the galaxy web site).
> >Anyway, I'd like to submit a bug report
> >r
> >
> >-------- Original Message --------
> >Subject: mail failed, returning to sender
> >Date: Tue, 17 Jan 2006 12:02 +0100
> >From: <[hidden email]>
> >To: [hidden email]
> >
> >
> >
> >|------------------------- Failed addresses follow:  
> >---------------------|
> ><[hidden email]> ... transport smtp: 550 <[hidden email]>:  
> >Recipient address rejected: User unknown in local recipient table
> >|------------------------- Message text follows:  
> >------------------------|
> >Received: from [130.37.31.65] (poederdoos.cs.vu.nl [130.37.31.65])
> > by top.few.vu.nl with esmtp (Smail #108)
> > id m1Eyobm-0002XpC; Tue, 17 Jan 2006 12:02 +0100
> >To:  [hidden email]
> >Subject: bug: genome intervals coord/documentation?
> >
> >in the help of "file upload" it says that the coords in genomic  
> >interval file are 0-based, end exclusive. Neither of these seem to  
> >be true, file:
> >
> >#CHROM    START    END    STRAND
> >chr1    108333207    108333209    +
> >
> >Extracts the sequence
> >
> >>hg15_chr1_108333207_108333209_+
> >ATG
> >
> >which is not 0-based (the same seq you can retrieve with genome  
> >browser, which is 1-based), neither end-exclusive (3 nucleotides).
> >
> >
> >--
> >Radek Szklarczyk, [hidden email], www.cs.vu.nl/~radek
> >
>
> _______________________________________________
> Galaxy-user mailing list
> [hidden email]
> http://mail.bx.psu.edu/cgi-bin/mailman/listinfo/galaxy-user