[Galaxy-user] Error running Galaxy on windows XP

classic Classic list List threaded Threaded
2 messages Options
Reply | Threaded
Open this post in threaded view
|

[Galaxy-user] Error running Galaxy on windows XP

rmorin
Hello developers.
I have just installed Galaxy on my Windows XP machine to try it out.  I
am having a problem running the server locally.  I ran the galaxy.py
script with no errors and I can load the page it generates in my
browser.  However, when I attempt to load some data from the UCSC
(following the flash demo) I am not able to load the UCSC table
browser.  When I run the test script (base_test.py) I get the following
printout (see below).  I'm sure it's something simple but I don't have
the expertise to try to debug this.  Can anyone help me out?

Thanks.

Ryan

C:\galaxy\tests>c:\Python24\python base_test.py
*** adding to sys.path
Testing individual deletes ... ERROR
Testing metadata editing ... ERROR
Testing home page ... ERROR
Checking data for multiple uploads ... ERROR
Testing single upload ... ERROR

======================================================================
ERROR: Testing individual deletes
----------------------------------------------------------------------
Traceback (most recent call last):
  File "C:\galaxy\tests\test_util.py", line 41, in setUp
    self.home()
  File "C:\galaxy\tests\test_util.py", line 50, in home
    tc.code(200)
  File "c:\galaxy\eggs\twill-0.8.3-py2.4.egg\twill\commands.py", line
115, in co
de
TwillAssertionError: code is 407 != 200

======================================================================
ERROR: Testing metadata editing
----------------------------------------------------------------------
Traceback (most recent call last):
  File "C:\galaxy\tests\test_util.py", line 41, in setUp
    self.home()
  File "C:\galaxy\tests\test_util.py", line 50, in home
    tc.code(200)
  File "c:\galaxy\eggs\twill-0.8.3-py2.4.egg\twill\commands.py", line
115, in co
de
TwillAssertionError: code is 407 != 200

======================================================================
ERROR: Testing home page
----------------------------------------------------------------------
Traceback (most recent call last):
  File "C:\galaxy\tests\test_util.py", line 41, in setUp
    self.home()
  File "C:\galaxy\tests\test_util.py", line 50, in home
    tc.code(200)
  File "c:\galaxy\eggs\twill-0.8.3-py2.4.egg\twill\commands.py", line
115, in co
de
TwillAssertionError: code is 407 != 200

======================================================================
ERROR: Checking data for multiple uploads
----------------------------------------------------------------------
Traceback (most recent call last):
  File "C:\galaxy\tests\test_util.py", line 41, in setUp
    self.home()
  File "C:\galaxy\tests\test_util.py", line 50, in home
    tc.code(200)
  File "c:\galaxy\eggs\twill-0.8.3-py2.4.egg\twill\commands.py", line
115, in co
de
TwillAssertionError: code is 407 != 200

======================================================================
ERROR: Testing single upload
----------------------------------------------------------------------
Traceback (most recent call last):
  File "C:\galaxy\tests\test_util.py", line 41, in setUp
    self.home()
  File "C:\galaxy\tests\test_util.py", line 50, in home
    tc.code(200)
  File "c:\galaxy\eggs\twill-0.8.3-py2.4.egg\twill\commands.py", line
115, in co
de
TwillAssertionError: code is 407 != 200

----------------------------------------------------------------------
Ran 5 tests in 0.218s

FAILED (errors=5)

Reply | Threaded
Open this post in threaded view
|

Re: Error running Galaxy on windows XP

Istvan Albert
Hello Ryan,

On 4/10/06, Ryan Morin <[hidden email]> wrote:

> TwillAssertionError: code is 407 != 200

does your Internet Explorer need some proxy settings when connecting
to the Internet?

Given the type of the error this would be my first guess. Setting IE
to work certain ways  affects how the network library will work from
other applications as well, in this case python.

Istvan.







--
Istvan Albert,
Research Associate,
Bioinformatics Consulting Center,
Huck Institute for Life Sciences,
Pennsylvania State University
http://www.personal.psu.edu/iua1