Galaxy Users List Archive

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Galaxy

This is the archive for the Galaxy-User mailing list, which was used from 2006 through April 2014 for Galaxy user support. In April 2014, Galaxy user support switched from the mailing list archived here to the Galaxy Biostar online forum. At that time this entire archive was also copied to the Galaxy Biostar site.

This list is no longer active.

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.
Galaxy is open source for all organizations. The public Galaxy service makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.

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Topics (2788)
Replies Last Post Views
Finding Galaxy version by Paul-Michael Agapow
1
by Nate Coraor
comparing data sets with different coordinates by dvera@bio.fsu.edu
0
by dvera@bio.fsu.edu
Performing operations on tab delimited text files by Lanelle Oni Edwards
1
by Luciano Cosme
(no subject) by Giuseppe Petrosino
0
by Giuseppe Petrosino
about ftp setting up by Liao_Ruiqi
1
by Luciano Cosme
Extract genomic DNA by Rebecca C Mueller
1
by Jeremy Goecks
Looking for Galaxy related papers (or have written one)? There is a new Galaxy Group @ CiteULike by Dave Clements-3
0
by Dave Clements-3
Lastz very slow by Andrew South
1
by Bob Harris
abolut ftp setup by Richard Liao
0
by Richard Liao
GI error/shift in the output of megablast ? by Sandrine Hughes
0
by Sandrine Hughes
Help need in troubleshooting cufflinks by Vijay T
0
by Vijay T
enabling regular users to upload large data volumes to a local Galaxy server by Yury Bukhman
2
by Yury Bukhman
Help by Giuseppe Petrosino
0
by Giuseppe Petrosino
EMBOSS fuzzpro tool pattern is not read correctly from the input by domantas.motiejunas
2
by domantas.motiejunas
Genomic interval file for GATK by Praveen Raj Somaraja...
2
by Praveen Raj Somaraja...
Text Editing by Jen Hillman-Jackson
2
by luce
Cucumber genome by changlong wen
1
by Dannon Baker
Cucumber genome by changlong wen
0
by changlong wen
January 2012 Galaxy Events: Dec 15 Deadline for Czech Republic Workshop by Dave Clements-3
0
by Dave Clements-3
cufflinks-status-FAIL by dongdong zhaoweiming
1
by Jen Hillman-Jackson
GI error/shift in the output of megablast ? by Sandrine Hughes
0
by Sandrine Hughes
FASTQ Groomer before BWA mapping ? by Praveen Raj Somaraja...
1
by Peter Cock
To post to list by Rose Iszati bte. Ism...
0
by Rose Iszati bte. Ism...
TopHat by Jen Hillman-Jackson
0
by Jen Hillman-Jackson
Random Intervals ? by Vincent Joseph Lynch
2
by Vincent Joseph Lynch
Question re: Quota not re-setting after data deletion by Mcgowen, Michael
1
by Jen Hillman-Jackson
Uploading Genome from Ensembl by Scroggins, Sheena
4
by Hiram Clawson
bed file to gene list by Christopher Futtner
1
by Jen Hillman-Jackson
How to select line with chr1? by Di Nguyen
1
by Jen Hillman-Jackson
[galaxy-dev] Urgent help needed by Toqa Manasrah
3
by Dannon Baker
Request to Add Reference Genome by Matthew Biggs
2
by Jen Hillman-Jackson
history was empty by dongdong zhaoweiming
1
by Ross-2
history was empty by dongdong zhaoweiming
0
by dongdong zhaoweiming
small RNA analysis by shamsher jagat
1
by Luciano Cosme
bowtie and bwa queue'd up for hours by Keith Giles-2
1
by Jen Hillman-Jackson
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