Galaxy Users List Archive

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Galaxy

This is the archive for the Galaxy-User mailing list, which was used from 2006 through April 2014 for Galaxy user support. In April 2014, Galaxy user support switched from the mailing list archived here to the Galaxy Biostar online forum. At that time this entire archive was also copied to the Galaxy Biostar site.

This list is no longer active.

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.
Galaxy is open source for all organizations. The public Galaxy service makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.

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Topics (2788)
Replies Last Post Views
(no subject) by Moein Farshchian
0
by Moein Farshchian
Deploying a tool by Mark Maienschein-Cli...
1
by Greg Von Kuster-2
How to add alignment to the MAF by chengyuyan
1
by Jen Hillman-Jackson
Trouble with BLAST+ and .loc file by Makis Ladoukakis-2
4
by Makis Ladoukakis-2
Tophat error by David Matthews
4
by David Matthews
Cuffdiff result P and q values by Ateequr Rehman
1
by Jen Hillman-Jackson
GCC2012 Early Registration is Now Open by Dave Clements-3
0
by Dave Clements-3
question about uploading data through URL method by Xiangming Ding
19
by Nate Coraor
Combining two workflows into one by Getiria Onsongo
3
by Getiria Onsongo
Dear Galaxy Developer, where is the "history/workflow" file stored in the local machine? by sterlesser
0
by sterlesser
Dear Galaxy Developer, where is the "history/workflow" file stored in the local machine? by sterlesser
0
by sterlesser
Dear Galaxy Developer, where is the "history/workflow" flow stored in the local machine? by yangchen
0
by yangchen
wig file conversion by Horvath, Lindsay
1
by Jen Hillman-Jackson
fastq-MCF by Benoît REMENANT
1
by Jen Hillman-Jackson
Read Length Distribution by Elad Firnberg
2
by Jen Hillman-Jackson
Question about aaChange tool. by Maha Al Kahtani
2
by Jen Hillman-Jackson
Tophat error by David Matthews
0
by David Matthews
Maq consensus calling changes quality score of the read? by Antony Jose
0
by Antony Jose
Tophat error by David Matthews
0
by David Matthews
Question about plotting circos plot by shamsher jagat
3
by Jen Hillman-Jackson
Quick question on generated tables by Carly Hom
1
by Ross-2
Error using intersect tool: "problem: 536870912 is larger than the size of this BitSet (536870912)." by Tim Reddy
1
by Jen Hillman-Jackson
Dataset name in dataset file by Cittaro Davide
1
by Jen Hillman-Jackson
Problem Interset interval tools by Mónica Pérez Alegre
1
by Jen Hillman-Jackson
Extracting number of reads from Bowtie analysis by Jerzy Dyczkowski
1
by Jen Hillman-Jackson
Metagenomics by Montoya, Vincent
8
by Jen Hillman-Jackson
bed to gff by Robin Mjelle
1
by Jen Hillman-Jackson
How to Pass Parameter by La Chi
1
by Jen Hillman-Jackson
March 12, 2012 Galaxy Development News Brief by Jen Hillman-Jackson
0
by Jen Hillman-Jackson
March 12, 2012 Galaxy Development News Brief by Jen Hillman-Jackson
0
by Jen Hillman-Jackson
March 12, 2012 Galaxy Development News Brief by Jen Hillman-Jackson
0
by Jen Hillman-Jackson
Advice on disabling SGE queue on galaxy-cloudman by John Major
3
by Enis Afgan-3
Re: [galaxy-dev] Welcome.html page by Greg Edwards
2
by Huayan Gao
Problems starting Galaxy Cloudman by Greg Edwards
5
by Greg Edwards
Incorrect permissions when uploading files by James Vincent
1
by Greg Von Kuster-2
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