Galaxy Users List Archive

This forum is an archive for the mailing list galaxy-user@bx.psu.edu (more options) Messages posted here will be sent to this mailing list.
Galaxy

This is the archive for the Galaxy-User mailing list, which was used from 2006 through April 2014 for Galaxy user support. In April 2014, Galaxy user support switched from the mailing list archived here to the Galaxy Biostar online forum. At that time this entire archive was also copied to the Galaxy Biostar site.

This list is no longer active.

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research.

  • Accessibility: Galaxy enables users without programming experience to easily specify parameters and run tools and workflows.
  • Reproducibility: Galaxy captures all information necessary so that any user can repeat and understand a complete computational analysis.
  • Transparency: Galaxy enables users to share and publish analyses via the web and create Pages--interactive, web-based documents that describe a complete analysis.
Galaxy is open source for all organizations. The public Galaxy service makes analysis tools, genomic data, tutorial demonstrations, persistent workspaces, and publication services available to any scientist that has access to the Internet. Local Galaxy servers can be set up by downloading the Galaxy application and customizing it to meet particular needs.

You can also search the archives of all mailing lists.

1 ... 31323334353637 ... 80
Topics (2788)
Replies Last Post Views
Galaxy logo: licence? (blog article project) by Louise-Amélie Schmit...
4
by Jeremy Goecks
Megablast question by shamsher jagat
1
by Jen Hillman-Jackson
equicktandem search not yielding any results by Harry Podschwit
0
by Harry Podschwit
(no subject) by Michael Sikes
0
by Michael Sikes
permissions on folder created by Galaxy by Guilhem Sempéré
1
by Jen Hillman-Jackson
Tophat paired end read by guzhi12345
2
by cjav
Question about megablast by shamsher jagat
1
by Jen Hillman-Jackson
inconsistency with query results at different time periods by Jen Hillman-Jackson
0
by Jen Hillman-Jackson
MarkupSafe cannot be fetched by Sarah Maman-2
2
by Sarah Maman-2
Multiple sample runs using workflow by Praveen Raj Somaraja...
1
by Jen Hillman-Jackson
Re: Galaxy Server running error in fetching sequences by Anton Nekrutenko
2
by Jen Hillman-Jackson
Generating gff file by Abdullah Al Mahmud
2
by Jen Hillman-Jackson
BWA in Galaxy by shamsher jagat
1
by Jen Hillman-Jackson
Cloudman - Problem starting shared cluster by greg
9
by Jen Hillman-Jackson
input for GATK DepthOfCoverage by Lilach F
1
by Lilach F
Blast2GO local instance Re: Table with gene count reads by Luciano Cosme
4
by Greg Von Kuster-2
Training on NGS data analysis by Aarti Desai-2
1
by Dave Clements-3
Google Summer of Code 2012 - Application Deadline on Friday 6th by Robin Haw
0
by Robin Haw
April 2012 Galaxy Update by Dave Clements-3
0
by Dave Clements-3
embl 66 genome for RNAseq analysis by Karthik Srinivasan
1
by Jen Hillman-Jackson
CummeRband in Galaxy platform by Bomba Dam
2
by Noa Sher-2
correct input into the minimum alignment count by vang0280
1
by Jen Hillman-Jackson
how to view the Tophat output ? by Xu, Jianpeng
3
by Jim Robinson
https://biocloudcentral.herokuapp.com/launch site is down by greg
3
by greg
Cow Genome update in Tophat by Mondongho
3
by Jen Hillman-Jackson
Subdivide peaks by Mónica Pérez Alegre
1
by Mónica Pérez Alegre
Cleanup script error - guess_dialect_for_url by rocco.piazza
1
by Jen Hillman-Jackson
How can I sort BAM/SAM file by read names? by cjav
1
by Jen Hillman-Jackson
Chip-seq exercise by Joshua Udall-2
2
by Casey Bergman
Reference genomes at local instance of Galaxy by Yang, Yanming
1
by Jen Hillman-Jackson
Table with gene count reads by Luciano Cosme
1
by Jen Hillman-Jackson
problems with color settings in Visualizations by Mackenzie Gavery
1
by Jeremy Goecks
"Job is waiting to run" by Shisheng Li
2
by Nate Coraor
Drosophila yakuba reference genome by Evgeny Brud
1
by Jen Hillman-Jackson
Bowtie Seed length (-l) and non-unique reads mode (m=-1) by Eric Guo
2
by Jen Hillman-Jackson
1 ... 31323334353637 ... 80