Downloading files

classic Classic list List threaded Threaded
2 messages Options
Reply | Threaded
Open this post in threaded view
|

Downloading files

KNIGHT M.R.

Is there any way of downloading processed files by e.g. FTP, rather than “Save as” in the web browser?  I have a large (9.6Gb) BAM file to download, and downloading it via the browser seems unstable for some reason. Thanks, Marc.

Reply | Threaded
Open this post in threaded view
|

Re: Downloading files

Jen Hillman-Jackson
Hi Marc,

Datasets can be downloaded over the command line by using e.g. wget or
curl; right click the disk icon that you would ordinarily use for saving
and copy the link location and paste that into your command line,
something like:

wget
'http://test.g2.bx.psu.edu/datasets/a4bee4ca343f03ba/display?to_ext=fasta'

The team is working no other strategies to enable the download of large
histories/datasets but nothing is in place yet.

Hopefully this helps,

Jen
Galaxy team


On 10/30/11 12:36 PM, KNIGHT M.R. wrote:

> Is there any way of downloading processed files by e.g. FTP, rather than
> “Save as” in the web browser? I have a large (9.6Gb) BAM file to
> download, and downloading it via the browser seems unstable for some
> reason. Thanks, Marc.
>
>
>
> ___________________________________________________________
> The Galaxy User list should be used for the discussion of
> Galaxy analysis and other features on the public server
> at usegalaxy.org.  Please keep all replies on the list by
> using "reply all" in your mail client.  For discussion of
> local Galaxy instances and the Galaxy source code, please
> use the Galaxy Development list:
>
>    http://lists.bx.psu.edu/listinfo/galaxy-dev
>
> To manage your subscriptions to this and other Galaxy lists,
> please use the interface at:
>
>    http://lists.bx.psu.edu/

--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org/wiki/Support

Jennifer Hillman-Jackson
http://galaxyproject.org